Publications

2014

Kang Rae Cho, James J. De Yoreo, “Probing protein assembly, biomineralization, and biomolecular interactions by atomic force microscopy”, NanoCellBiology - Multimodal Imaging in Biology & MedicineChapter 5 (p85-130), (Editors: Bhanu Jena, Douglas Taatjes, Print ISBN: 9789814411790), (2014-04-30).

Kim S., Fornasiero F., Park H.G., In J.B., Meshot E. et al., “Fabrication of flexible, aligned carbon nanotube/polymer composite membranes by in-situ polymerization”, J. Membrane Sci. 460: 91-98 (2014)

Fischer NO, Blanchette CD, Rasley A. “Enhancing the efficacy of innate immune agonists: could nanolipoprotein particles hold the key?” Nanomedicine, 2014, 9:369

Fischer NO, Rasley A, Blanchette CD. “Nanoparticles and antigen delivery: Understanding the benefits and drawbacks of different delivery platforms”. Nanomedicine, 2014, 9:373.

Fischer NO, Weilhammer DR, Dunkle A, Thomas C, Hwang M, Corzett M, Lychak C, Mayer W, Urbin S, Collette N, Chiun Chang J, Loots GG, Rasley A, Blanchette CD. “Evaluation of Nanolipoprotein Particles (NLPs) as an In Vivo Delivery Platform”. PLoS ONE, 2014 9(3):e93342. PMID: 24675794.

2013

Weilhammer DR, Blanchette CD, Fischer NO, Alam S, Loots GG, Corzett M, Thomas C, Lychak, C, Dunkle AD, Ruitenberg JJ, Ghanekar SA, Sant AJ, Rasley A. “Nanolipoprotein delivery enhances immunostimulatory properties of innate immune agonists and provides protection against lethal influenza challenge”. Biomaterials, 2013, 34:10305

He W, Luo J, Bourguet F, Xing L, Yi SK, Gao T, Blanchette CD, Henderson PT, Kuhn E, Malfatti M, Murphy W, Cheng H, Lam K, Coleman MA. “Controlling the diameter, monodispersity and solubility of apoA1 nanolipoprotein particles using telodendrimer chemistry”. Protein Science, 2013, 22:1078.

Chahine NO, Blanchette CD, Thomas CB, Lu J, Haudenschild D, Loots GG. “Effect of age and cytoskeletal elements on the indentation-dependent mechanical properties of chondrocytes”. PLoS ONE, 2013, 8(4) e1651.

Fischer NO, Rasley A, Corzett M, Hwang M, Hoeprich PD, Blanchette CD. “Colocalized delivery of adjuvant and antigen using nanolipoprotein particles enhances the immune response to recombinant antigens”. Journal of American Chemical Society, Communication, 2013, 135:2044.

“Colocalized Delivery of Adjuvant and Antigen Using Nanolipoprotein Particles Enhances the Immune Response to Recombinant Antigens”  Nicholas O. Fischer, Amy Rasley, Michele Corzett, Mona H. Hwang, Paul D. Hoeprich and Craig D. Blanchette (2013) J. Amer. Chem. Soc. 135(6):2044-2047

Xia Long, Yurong Ma, Kang Rae Cho, Dongsheng Li, James J. De Yoreo, Limin Qi, “Oriented calcite micropillars and prisms formed through aggregation and recrystallization of poly(acrylic acid) stabilized nanoparticles”, Cryst. Growth Des., 13, 3856-3863 (2013).

Kang R. Cho, E. Alan Salter, James J. De Yoreo, Andrzej Wierzbicki, Selim Elhadj, Yu Huang, S. Roger Qiu, “Growth inhibition of calcium oxalate monohydrate crystal by linear aspartic acid enantiomers investigated by in situ atomic force microscopy”,

(Inside front cover, Also selected as a Hot Article), CrystEngComm, 15, 54-64 (2013).

Udey, R.N., A.D. Jones, and G.R. Farquar, Aerosol and Microparticle Generation Using a Commercial Inkjet Printer. Aerosol Science and Technology, 2013. 47(4): p. 361-372.

Pedersoli, E., et al., Mesoscale Morphology of Airborne Core-shell Nanoparticle Clusters: X-ray Laser Coherent Diffraction Imaging. Journal of Physics B: Atomic, Molecular and Optical Physics, 2013. 46(16): p. 164033 (10 pp.)-164033 (10 pp.).

Loh, N.D., et al., Sensing the wavefront of x-ray free-electron lasers using aerosol spheres. Optics Express, 2013. 21(10): p. 12385-12394.

Wheeler, E.K., Baker, B.R., Piggott, W.T., Mabery, S.L., Hara, C.A., DeOtte, J., Benett, W., Mukerjee, E.V., Dzenitis, J., and Beer, N.R. “On-Chip Laser-Induced DNA Dehybridization”. Analyst, 138(13): 3692 (2013). http://dx.doi.org/10.1039/C3AN00288H

Ao resolution in protein 2D-crystal X-ray diffraction at LCLS, B. Pedrini, et al., accepted by Phil. Trans. B., Jan 2014.

Femtosecond X-ray diffraction from Two-dimensional protein crystals, M. Frank, et al., accepted by Internat. Union Crystal. J., Jan 2014.

Toward unsupervised single-shot diffractive imaging of heterogeneous particles using x-ray free-electron lasers, H. J. Park, et al.(57 authors), Optics Exp, 21, 23, 28729-28742, 2013

Mesoscale morphology of airborne core–shell nanoparticle clusters: x-ray laser coherent diffraction imaging, E. Pedersoli, et al.(62 authors), J. Phys. B: Atomic, Mol. and Opt. Phys., 46, 164033, 2013.

Sensing the wavefront of x-ray free-electron lasers using aerosol spheres, N. D. Loh, et al.(57 authors), Optics Exp., 21, 10, 1238512394   DOI:10.1364/OE.21.012385, May 2013.

“Inhomogeneous Diffusion of Copper in NIF Beryllium Ablator Shells”,H. Huang, H. Xu, K. Youngblood, A. Nikoos, K. J. Wu, M. Y. Wang and A. V. Hamza
Fusion Science and Technology, 63, 190 (2013)

“Characterization of Thin Copper Diffusion Barrier Layer in Beryllium Capsules”,,H. Xu, K. P. Youngblood, H. Huang, K. J. Wu, K. A. Moreno, A. Nikroo, S. J. Shin, Y. M. Wang, A. V. Hamza, Fusion Science and Technology, 63, 202 (2013)

“Thin Oxide and the Diffusion Barrier in NIF Beryllium Ablator Shells”, K. P. Youngblood, H. Huang, H. Xu, A. Nikoos, K. J. Wu, M. Y. Wang and A. V. Hamza
Fusion Science and Technology, 63, 208 (2013)

“Coating functional sol-gel films into horizontally rotating cylinders by rimming flow/state”,C. Dawedeit, C. C. Walton, A. A. Chernov, S. H. Kim, M. Worsley, T. Braun, S. A. Gammon, .J H. Satcher, K. J. Wu, A. V. Hamza and J. Biener, J. Sol Gel Sci. Tech., 65, 170 (2013)

“Deterministic Control over High-Z Doping of Polydicyclopentadiene-based Aerogels and Their Coatings”,S. H. Kim, S. J. Shin, M. Lenhardt, T. Braun, J. D. Sain, C. A. Valez, S. O. Kucheyev, K. J. Wu, J. Biener, J. H. Satcher, A. V. Hamza, ACS Appl. Mater. Interfaces, 5 (16), 8111 (2013)

2012

In J.B., Lee D., Fornasiero F., Noy A., Grigoropoulos C.P. “Laser-Assisted Simultaneous Transfer and Patterning of Vertically Aligned Carbon Nanotube Arrays on Polymer Substrates for Flexible Devices,” ACSNano 6 (9): 7858-7866 (2012)

Blanchette CD, Lacayo CI, Fischer NO, Hwang M, Thelen MP. “Enhanced Cellulose Degradation Using Cellulase-Nanosphere Complexes”. PLoS ONE, 2012, 7(8): e42116. doi:10.1371/journal.pone.0042116.

Kang Rae Cho, E. Alan Salter, James J. De Yoreo, Andrzej Wierzbicki, Selim Elhadj, Yu Huang, S. Roger Qiu, “Impact of chiral molecules on the formation of biominerals: a calcium oxalate monohydrate example”, Cryst. Growth Des., 12, 5939-5947 (2012).

Keith M. Bromley, Rajamani Lakshminarayanan, Mitchell Thompson, Sowmya B. Lokappa, Victoria A. Gallon, Kang Rae Cho, S. Roger Qiu, Janet Moradian-Oldak, “Amelogenin processing by MMP-20 prevents protein occlusion inside calcite crystals”, Cryst. Growth Des., 12, 4897-4905 (2012).

Xiaoyu, Z., et al., Design and optimization of a light-emitting diode projection micro-stereolithography three-dimensional manufacturing system. Review of Scientific Instruments, 2012. 83(12): p. 125001 (6 pp.)-125001 (6 pp.).

Loh, N.D., et al., Profiling structured beams using injected aerosols, in X-Ray Free-Electron Lasers: Beam Diagnostics, Beamline Instrumentation, and Applications, S.P. Moeller, M. Yabashi, and S.P. HauRiege, Editors. 2012.

Loh, N.D., et al., Fractal morphology, imaging and mass spectrometry of single aerosol particles in flight (vol 486, pg 513, 2012). Nature, 2012. 489(7416).

Olson, T. Orme, C., Han, T. et al, Shape control synthesis of fluorapatite structures based on supersaturation: prismatic nanowires, ellipsoids, star and aggregate formation, CrystEngChem, 20, pp 6384-6389, (2012)

Fractal morphology, imaging and mass spectrometry of single aerosol particles in flight, N. D. Loh, et al.(56 authors), Nature, 489, 7416, DOI: 10.1038/nature11426,   Sep 2012.

Protein crystallography using X-ray free-electron lasers, M. Hunter, et al., Protein Science, 21, SI   Supplement 1, 219-220, Aug 2012.

Profiling structured beams using injected aerosols, N. D. Loh, et al.(57 authors), X-Ray Free-Electron Lasers: Beam Diagnostics, Beamline Instrum., Appl., Proc. of SPIE, 8504, 850403   DOI: 10.1117/12.930075, 2012.  

Re-electrospraying Splash Landed Proteins and Particles, W. H. Benner, G.S. Lewis, S.V. Hering, B. Selgelke, M. Corzett, J.E. Evans, and F.C. Lightstone, Anal. Chem., 84, 2498-2504, 2012.

Profiling structured beams using injected aerosols, Loh, N.D., D. Starodub,  L. Lomb, et al., X-ray free-electron lasers: beam diagnostics, beamline instrumentation, and applications, Proceedings of SPIE, 8504, Article Number: 850403, 2012.

“A New Approach to Foam-lined Indirect-Drive NIF Ignition Targets”, J. Biener, C. Dawedeit, S. H. Kim, T. Braun, M. A. Worsley, A. A. Chernov, C. C. Walton, T. M. Willey, S. O. Kucheyev, M. Y. Wang, M. M. Biener, A. van Buuren, K. J. Wu, J. H. Satcher, Jr. and A. V. Hamza,,Nuclear Fusion, 52, 62001 (2012)

“Tuning the Rheological Properties of Low-Density Aerogels for Coating Applications”,C. Dawedeit, S. H. Kim, T. Braun, M. Worsley, S. A. Letts, K. J. Wu, C. Walton, A. A. Chernov, J. H. Satcher, A. V. Hamza, J. Biener,,Soft Matter, 8, 3518–3521 (2012)

“Exploration of the Versatility of Ring Opening Metathesis Polymerization: an Approach for Gaining Access to Low Density Polymeric Aerogels”, S. H. Kim, M. A. Worsley, C. A. Valez, S. J. Shin, S. O. Kucheyev, K. J. Wu, J. Biener, J. H. Satcher, A. V. Hamza, RCS Advance, 2, 8672 (2012)

“Polishing and Local Planarization of Plastic Spherical Capsules using Tumble Finishing”, T. I. Suratwala, W. A. Steele, M. D. Feite, K. Moreno, M. Stadermann, J. Fair, K. Chen, A. Nikroo, K. Youngblood, K. J. Wu, Appl. Surf. Sci., 261, 679 (2012)

2011

Gao T, Blanchette CD, He W, Bourguet F, Ly S, Katzen F, Kudlicki WA, Henderson PT, Laurence TA, Huser T and Coleman MA. “Characterizing diffusion dynamics of a membrane protein associated with nanolipoproteins using fluorescence correlation spectroscopy”.  2011 Protein Science, 20:437.

“Repurposing screens identify rifamycins as potential broad-spectrum therapy for multidrug-resistant A. baumannii and select agent microorganisms”, Brett A. Chromy, Mahar Elsheikh, Doug Livingston, Kyle Petersen, Jane P. Bearinger and Paul D. Hoeprich (2012) Future Microbiol. 7(8):1-9

“High-throughput isotopic analysis of RNA microarrays to quantify microbial resource use”, Xavier Mayali, Peter Weber, Eoin L. Brodie, Shalini Mabery, Paul D. Hoeprich and Jennifer Pett-Ridge (2011) The ISME Journal doi:10.1038/ismej.2011.175

6. Kang R. Cho, Yu Huang, Shuiliang Yu, Shaoman Yin, Marco Plomp, S. Roger Qiu, Rajamani Lakshminarayanan, Janet Moradian-Oldak, Man-Sun. Sy, James J. De Yoreo, “A multistage pathway for human prion protein aggregation in vitro: from multimeric seeds to β-oligomers and non-fibrillar structures”, J. Am. Chem. Soc., 133, 8586-8593 (2011).

Lulevich, S. Kim, C. P. Grigoropoulos, and A. Noy, “Frictionless sliding of ssDNA in a carbon nanotube pore observed by single molecule force spectroscopy”, Nano Letters, 11, 1171-1176, 2011.

Martin, A.V., et al., Single particle imaging with soft X-rays at the Linac Coherent Light Source, in Advances in X-Ray Free-Electron Lasers: Radiation Schemes, X-Ray Optics, and Instrumentation, T. Tschentscher and D. Cocco, Editors. 2011.

C. A. Orme , B. Sadigh, M. Surh, J. Vandersall, P. Bedrossian, W. D. Wilson, T. W. Barbee Jr. and P. T. Beernink,  Inducing order using nanolaminate templates. J. Materials Research 26, pp 194-204  (2011). Special issue on self-assembly.

T. Monson, C. Hollars, C. Orme, and T. Huser; Improving Nanoparticle Dispersion and Charge Transfer in Cadmium Telluride Tetrapod and Conjugated Polymer Blends, ACS Applied Materials & Interfaces pp 1077-1082 (2011)

Bearinger, J.P., Dugan, L.C., Baker, B.R., Hall, S.B., Ebert, K., Mioulet, V., and King, D.P. “Development and Initial Results of a Low Cost, Disposable, Point-of-Care Testing Device for Pathogen Detection”. IEEE Trans. Biomed. Eng., 58: 805 (2011). http://dx.doi.org/10.1109/TBME.2010.2089054

Torres, C.L., Vitalis, E.A., Baker, B.R., Gardner, S.N., Torres, M.W., and Dzenitis, J.M. “LAVA: An Open-Source Approach To Designing LAMP (Loop-Mediated Isothermal Amplification) DNA Signatures”. BMC Bioinformatics, 12: 240 (2011). http://dx.doi.org/10.1186/1471-2105-12-240

2010

Fornasiero F., In J.B., Kim S., Park H.G., Wang Y., Grigoropoulos C.P., Noy A., Bakajin O., “pH-Tunable Ion Selectivity in Carbon Nanotube Pores,” Langmuir 26 (18): 14848-14853 (2010)

Blanchette CD, Fischer NO, Corzett M, Bench G, and Hoeprich PD. “Kinetic analysis of His-tagged protein binding to nickel-chelating nanolipoprotein particles”. Bioconjugate Chemistry, 2010. 21:1321.

Fischer NO, Infante E, Ishikawa T, Blanchette CD, Bourne N, Hoeprich PD, and Mason PW. “Conjugation to nickel-chelating nanolipoprotein particles increases the potency and efficacy of subunit vaccines to prevent West Nile encephalitis”. Bioconjugate Chemistry, 2010. 21:1018.

Fischer NO, Blanchette CD, Segelke BW, Corzett M, Chromy BA, Kuhn EA, Bench G, and Hoeprich PD. “Isolation, characterization, and stability of discretely-sized nanolipoprotein particles assembled with apolipophorin-III” PLoS ONE, 2010. ,5:e11643.

“Conjugation to Nickel-Chelating Nanolipoprotein Particles Increases the Potency and Efficacy of Subunit Vaccines to Prevent West Nile Encephalitis”, Nicholas O. Fischer, Ernesto Infante, Tomohiro Ishikawa, Craig D. Blanchette, Nigel Bourne, Paul D. Hoeprich, and Peter W. Mason (2010) Bioconj. Chem. 21:1018-1022

“Kinetic Analysis of His-Tagged Protein Binding to Nickel-Chelating Nanolipoprotein Particles” Craig D. Blanchette, Nicholas O. Fischer, Michele Corzett, Graham Bench and Paul D. Hoeprich (2010) Bioconj. Chem. 21:1321–1330

”Isolation, Characterization and Stability of Discretely-Sized Nanolipoprotein Particles Assembled with Apolipophorin-III”, Nicholas O. Fischer, Craig D. Blanchette, Brent W. Segelke, Michele Corzett, Brett A. Chromy, Edward A. Kuhn, Graham Bench and Paul D. Hoeprich (2010) PLoS One 5:1-9, e11643

Martin, A.N., et al., Human breath analysis: methods for sample collection and reduction of localized background effects. Analytical and Bioanalytical Chemistry, 2010. 396(2): p. 739-750.

Davis, C.E., et al., Analysis of Volatile and Non-Volatile Biomarkers in Human Breath Using Differential Mobility Spectrometry (DMS). Ieee Sensors Journal, 2010. 10(1): p. 114-122.

Barker, Z., et al., Detecting trace pesticides in real time using single particle aerosol mass spectrometry. Analytica Chimica Acta, 2010. 661(2): p. 188-194.

“Applying Imaging ToF-SIMS and PCA in Differentiation of Tissue Types”, L. Wu, J. S. Felton, K. J. Wu,, Mass Spectrometry Imaging Principles and Protocols - Methods in Molecular Biology, Volume 656, 285-301, S. S. Rubakhin and J. V. Sweedler, eds. Springer (2010)

“Theory-guided growth of AlSb single crystals for radiation detection”, V. Lordi, P. Erhart, D. Aber, B. Sturm, K. J. Wu,, Appl. Phys. Lett.  97, 142104, (2010)

2009

Stadermann M., Sherlock S.P., In J.B., Fornasiero F., Park H.G., Artyukhin A.B., Wang Y., De Yoreo J.J., Grigoropoulos C.P., Bakajin O., Chernov A. A., Noy  A., “Mechanism and Kinetics of Growth Termination in Controlled CVD Growth of Multi-wall Carbon Nanotube  Arrays”, Nano Letters 9 (2): 738-744 (2009)

Longo ML, Blanchette CD “Imaging Cerebroside-rich Domains for Phase and Shape Characterization in Binary and Ternary Mixtures.” Biochemica et Biophysica Acta – Biomembranes, 2009. 1357-67.

Blanchette CD, Woo Y-H, Thomas C, Shen N, Sulchek TA, Hiddessen AL. “Decoupling Internalization, Acidification and Phagosomal-Endosomal/lysosomal Fusion during Phagocytosis of InlA Coated Beads in Epithelial Cells. PLoS ONE. 2009, 4:e6056.

Blanchette CD, Segelke B, Fischer NO, Corzett M, Kuhn EA, Cappucio J, Benner WH, Coleman M, Chromy B, Bench G, Hoeprich PD, Sulchek T. “Characterization and Purification of Polydisperse Reconstituted Lipoproteins and Nanolipoprotein Particles.” International Journal of Molecular Sciences. 2009, 10, 2958-2971.

Baker SE, Hopkins RC, Blanchette CD, Walsworth VL, Fischer NO, Kuhn EA,. Chromy B, Létant SE, Hoeprich PD, Adams MWW, and Henderson PT. “Hydrogen Production by Pyrococcus furiosus Membrane-Bound Hydrogenase in Soluble Nanolipoprotein   Particles.” Journal of American Chemical Society Communication, 2009: 131:7508.

Fischer NO, Blanchette CD, Chromy BA, Kuhn EA, Segelke BW, Corzett M, Bench G, Mason PW, Hoeprich PD. “Immobilization of His-tagged proteins on  nickel-   chelating nanolipoprotein particles.”  Bioconjugate Chemistry. 2009, 20:460-465.

Goksu EI, Vanegas JM, Blanchette CD, Lin W-C, Longo ML. “AFM for structure and Dynamics of Biomembranes.” Biochim. Biophys. Acta. 2009, 1788:254- 266.

Blanchette CD, Cappuccio JA, Kuhn EA, Walsworth VL, Segelke BW, Benner WH,  Chromy B, Coleman M, Bench G, Hoeprich PD, Sulchek TA. “Atomic Force Microscopy Differentiates Discrete Size Distributions between Membrane Protein Containing and Empty Nanolipoprotein Particle.” Biochim. Biophys. Acta.- Biomembranes. 2009, 1788:724-731.

“Hydrogen Production by a Hyperthermophilic Membrane-Bound Hydrogenase in Water-Soluble Nanolipoprotein Particles”, Sarah E. Baker, Robert C. Hopkins, Craig D. Blanchette, Vicki L. Walsworth, Rhoda Sumbad, Nicholas O. Fischer, Edward A. Kuhn, Matt Coleman, Brett A. Chromy, Sonia E. Letant, Paul D. Hoeprich, Michael W. W. Adams and Paul T. Henderson (2009) J. Amer. Chem. Soc. 131:7508-7509

“Characterization and Purification of Polydisperse Reconsituted Lipoproteins and Nanolipoprotein Particles”, Craig D. Blanchette, Brent W. Segelke, Nicholas Fischer, Michele H. Corzett, Edward Kuhn, Jenny A. Cappuccio, Henry Benner, Matthew A. Coleman, Brett A. Chromy, Graham Bench, Paul D. Hoeprich and Todd A. Sulchek (2009) International J. of Mol. Sciences 10(7), 2958-2971

“Immobilization of His-tagged Proteins on Nickel-Chelating Nanolipoprotein Particles”, Nicholas O. Fischer, Craig D. Blanchette, Brett A. Chromy, Edward A. Kuhn, Brent W. Segelke, Michele Corzett, Graham Bench, Peter W. Mason and Paul D. Hoeprich (2009) Bioconjugate Chemistry 20:460-465

Han, T. Y. J., P. F. Pagoria, Gash, A.E., Maiti, A., Orme, C.A., Mitchell, A.R. and Fried, L.E. (2009). "The solubility and recrystallization of 1,3,5-triamino-2,4,6-trinitrobenzene in a 3-ethyl-1-methylimidazolium acetate-DMSO co-solvent system." New Journal of Chemistry 33(1): 50-56. (Cover Article)

Huser, T., C. A. Orme, Hollars, C.H., Corzett, M. H., and Balhorn, R. (2009). "Raman spectroscopy of DNA packaging in individual human sperm cells distinguishes normal from abnormal cells." Journal of Biophotonics 2(5): 322-332.

Woo, L. Y., R. S. Glass, Gorte, R., Orme, C.A., Nelson, A., (2009). "Dynamic Changes in LSM Nanoparticles on YSZ: A Model System for Non-Stationary SOFC Cathode Behavior." Journal of the Electrochemical Society 156(5): B602-B608.

“Chemometric and Statistical Analysis of ToF-SIMS Spectra of Increasing Complex Samples ”, E. S. F. Berman, D. Nelson, S. L. Fortson, K. S. Kulp, J. S. Felton and K. J. Wu, Surface and Interface Analysis, 41, 97 (2009)